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PEDS Advance Access published online on January 12, 2004

Protein Engineering Design and Selection, doi:10.1093/protein/gzh017
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Received September 2, 2003
Revised November 17, 2003
Accepted December 10, 2003

Article

Improved activity and thermostability of Candida antarctica lipase B by DNA family shuffling

Wen-Chen Suen 1*, Ningyan Zhang 2, Li Xiao 3, Vincent Madison 3, and Aleksey Zaks 2

1 Biotransformations Group, Schering-Plough Research Institute, Union, NJ 07083, USA; Schering-Plough Research Institute, U-13-3000, 1011 Morris Avenue, Union, NJ 07083
2 Biotransformations Group, Schering-Plough Research Institute, Union, NJ 07083, USA
3 Structural Chemistry, Schering-Plough Research Institute, Union, NJ 07083, USA

* To whom correspondence should be addressed. E-mail: wen-chen.suen{at}spcorp.com.


   Abstract

DNA family shuffling was used to create chimeric lipase B proteins with improved activity toward the hydrolysis of diethyl 3-[3', 4'-dichlorophenyl]-glutarate (DDG). Three homologous lipases from Candida antarctica ATCC 32657, Hyphozyma sp. CBS 648.91, and Crytococcus tsukubaensis ATCC 24555 were cloned and shuffled to generate a diverse gene library. A high-throughput screening assay was developed and used successfully to identify chimeric lipase B proteins having a 20-fold higher activity toward DDG than lipase B from Candida antarctica ATCC 32657 and a 13-fold higher activity than the most active parent derived from Crytococcus tsukubaensis ATCC 24555. In addition, the stability characteristics of several highly active chimeric proteins were also improved as a result of family shuffling. For example, the half life at 45°C and melting point (Tm) of one chimera exceeded those of lipase B from Candida antarctica ATCC 32657 by 11-fold and 6.4°C, which closely approached the stability characteristics of the most thermostable parent derived from Hyphozyma sp. CBS 648.91,

Keywords: CALB/enantioselectivity/family shuffling/ lipase/thermostability


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