Protein Engineering Design and Selection

ORIGINAL ARTICLES:

Rudresh, Rinku Jain, Vardhan Dani, Ashima Mitra, Sarika Srivastava, Siddhartha P. Sarma, R. Varadarajan, and S. Ramakumar

Structural consequences of replacement of an -helical Pro residue in Escherichia coli thioredoxin
Protein Eng. 2002 15: 627-633; doi:10.1093/protein/15.8.627 [Abstract] [FREE Full Text] [PDF] [Request Permissions]  

Ornella Maglio, Jose W. Saldanha, Susanne Vrtala, Susanne Spitzauer, Rudolf Valenta, and Annalisa Pastore

A major IgE epitope-containing grass pollen allergen domain from Phl p 5 folds as a four-helix bundle
Protein Eng. 2002 15: 635-642; doi:10.1093/protein/15.8.635 [Abstract] [FREE Full Text] [PDF] [Request Permissions]  

Weizhong Li, Lukasz Jaroszewski, and Adam Godzik

Sequence clustering strategies improve remote homology recognitions while reducing search times
Protein Eng. 2002 15: 643-649; doi:10.1093/protein/15.8.643 [Abstract] [FREE Full Text] [PDF] [Request Permissions]  

Harri Santa, Markku Ylisirniö, Tommi Hassinen, Reino Laatikainen, and Mikael Peräkylä

Stability and amino acid preferences of type VIII reverse turn: the most common turn in peptides?
Protein Eng. 2002 15: 651-657; doi:10.1093/protein/15.8.651 [Abstract] [FREE Full Text] [PDF] [Request Permissions]  

Uttamkumar Samanta, Ranjit P. Bahadur, and Pinak Chakrabarti

Quantifying the accessible surface area of protein residues in their local environment
Protein Eng. 2002 15: 659-667; doi:10.1093/protein/15.8.659 [Abstract] [FREE Full Text] [PDF] [Request Permissions]  

Claudia Machicado, Marta Bueno, and Javier Sancho

Predicting the structure of protein cavities created by mutation
Protein Eng. 2002 15: 669-675; doi:10.1093/protein/15.8.669 [Abstract] [FREE Full Text] [PDF] [Request Permissions]  

Xiao Hui Ma, Cun Xin Wang, Chun Hua Li, and Wei Zu Chen

A fast empirical approach to binding free energy calculations based on protein interface information
Protein Eng. 2002 15: 677-681; doi:10.1093/protein/15.8.677 [Abstract] [FREE Full Text] [PDF] [Request Permissions]  

Hyongi Chon, Yasuo Tsunaka, Mitsuru Haruki, Masaaki Morikawa, and Shigenori Kanaya

Site-specific cleavage of MS2 RNA by a thermostable DNA-linked RNase H
Protein Eng. 2002 15: 683-688; doi:10.1093/protein/15.8.683 [Abstract] [FREE Full Text] [PDF] [Request Permissions]  

Ki-Hoon Oh, Sung-Hun Nam, and Hak-Sung Kim

Improvement of Oxidative and Thermostability of N-Carbamyl-D-Amino Acid Amidohydrolase by Directed Evolution
Protein Eng. 2002 15: 689-695; doi:10.1093/protein/15.8.689 [Abstract] [FREE Full Text] [PDF] [Request Permissions]  

Koji Ogata and Shoshana J. Wodak

Conserved water molecules in MHC class-I molecules and their putative structural and functional roles
Protein Eng. 2002 15: 697-705; doi:10.1093/protein/15.8.697 [Abstract] [FREE Full Text] [PDF] [Request Permissions]  

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